Identification of endogenous retrovirus env genes in the genome of Gallus gallus and their expression profile analysis during early embryogenesis

Retrovirus env genes “captured” in the genome of viviparous ancestors play a critical role in placenta development of eutherian mammals being involved in the cell-cell fusion and maternal-fetal immune tolerance. In order to find out the role of env genes in the development of extraembryonic mesoderm, we chose the chicken embryo as a very convenient model of early embryogenesis. We detected 70 ORFs encoding TLV-coat by in silico search. The HMMER algorithm was used to select 10 genes (Gal-Env1-10) whose proteins had canonical Env domains and motives.

Retroviral envelope protein-based phylogenetic tree with the identified Gallus-Env protein candidates. Incorporation of Gal-Env1-10 into a phylogenetic tree demonstrates that they are distinct from previously identified Env proteins and that almost all Gal-Envs cluster with avian alpharetroviruses: Avian leukosis virus (ALV) and Rous sarcoma virus (RSV).

We conclude that the role of env genes is not restricted only to placentation and functional integration might have occurred in more archaic oviparous species. Therefore, it was interesting to define the function of env genes in the evolutionary transition from egg-laying to placental animals.



















Whole-mount in situ hybridizations showing Gal-env1 expression at stages HH8-18 of chicken embryo development. At early stages HH8-9 Gal-env1 expression observed in extraembryonic area and head forming region (A). Histological analysis showed a specific signal in heart (B), yolk sac and chorion (C). The expression of Gal-env1 begins in lateral plate mesoderm, in contrast to segmental plate mesoderm (D). Strong and highly specific signal was detected in dermamyotome of somite at stage HH18 (E,F)



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